UCSC Cell Browser
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Qualitative: Rainbow
Qualitative: Tatarize
Qualitative: Iwanthue
Semi-Qualitative: Paul Tol's
Gradient: shades of blue
Gradient: shades of red
Gradient: beige to red
Gradient: blue to red
Gradient: Viridis
Gradient: Magma
Gradient: Inferno
Gradient: Plasma
Annotation
Gene
Layout
Color by Annotation
nGene
nUMI
Age_(Carnegie_Stage)
percent.ribo
Individual
Area_As_Annotated
Area
V1
nCount_RNA
nFeature_RNA
percent.mt
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Label by Annotation
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Age_(Carnegie_Stage)
Individual
Area_As_Annotated
Area
V1
Cluster
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Cell
nGene
nUMI
Age (Carnegie Stage)
percent.ribo
Individual
Area As Annotated
Area
V1
nCount RNA
nFeature RNA
percent.mt
Cluster
Color by Gene
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Multi Gene
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Recent Genes
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null
Dataset Genes
No genes or peaks defined. Use the setting quickGenesFile in
Layout
UMAP
tSNE
UMAP
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Gene Expression Plots
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