UCSC Cell Browser
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Qualitative: Rainbow
Qualitative: Tatarize
Qualitative: Iwanthue
Semi-Qualitative: Paul Tol's
Gradient: shades of blue
Gradient: shades of red
Gradient: beige to red
Gradient: blue to red
Gradient: Viridis
Gradient: Magma
Gradient: Inferno
Gradient: Plasma
Annotation
Gene
Layout
Color by Annotation
Sample_ID
CellType
UMI Count
log1p_n_counts
Expressed Genes
log1p_n_genes
Percent Mitochond.
percent_ribo
percent_hb
percent_top50
CellType
Label by Annotation
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Sample_ID
CellType
Sample_ID
Hover over a cell to update data below
Cells are selected. No update on hover.
index
Sample ID
CellType
UMI Count
log1p n counts
Expressed Genes
log1p n genes
Percent Mitochond.
percent ribo
percent hb
percent top50
Color by Gene
Split on this gene
Multi Gene
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Recent Genes
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Click to color by gene
null
Dataset Genes
PCSK1N
NEUROD1
CHGA
PRAP1
ALDOB
IL32
TFF3
SPINK4
FCGBP
SPIB
CA7
HSPB1
RPLP1
RPS29
RPS18
OLFM4
RPS12
HMGB2
STMN1
H2AFZ
Layout
umap_hm
umap_hm
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Gene Expression Plots
Genome Browser
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